PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485676.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 471aa    MW: 52185.9 Da    PI: 4.9685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.41.6e-053613981254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_004485676.1 361 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 398
                     66778899999****9998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.134349398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-9359408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-12359417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.52E-5361402No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MAEEYQAGIC GETWWNINNS TRGVFPLMMN SSSTCSIAAN DGGNYSTWQN EFFGLKETTT  60
TTKSCSIEET NTNFDVSDGS FCFLDTHKPQ QSESANLIDS TLQIMDFGLS SPTSSNWNHS  120
LFGTGRPENN FHSVLEEETM IESSNNSQIQ KEWNTKNMIS STSGIRQVST LDAFKPMDQE  180
FSLDEQSGLS CGFPIETSNS YDYPSTLIQS LFDPQTQPQP QTHNSLFTNP CISYSSSANY  240
GTSSNEVSSP TWSKISSLMK PSMPKQQLSG LQFSNNTPFW NASAEALNDI RAGVLASSQA  300
QYQSPNFEDK RLNCPITLLN KLKREESPER TKKNSSEGAV KRARIETPSP LPTFKVCGQV  360
RKEKLGDRIT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVNVLSAPYM KNGSPIQHHQ  420
GCDNVKESEG KKQDLRSQGL CLVPIASTFP VTNETIVDFW TPSFGGPLFG R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485676.10.0PREDICTED: transcription factor bHLH112-like isoform X1
TrEMBLV7BQN40.0V7BQN4_PHAVU; Uncharacterized protein
STRINGGLYMA15G07010.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.39e-54bHLH family protein